Cell tracking software page
The software described here is designed for the extraction of time series data from a sequence of fluorescence images.
It's written in IDL scripting language similar to Matlab and should run on any
platform where IDL runs (tested on Linux, Mac, and Windows). To submit a comment or bug report,
please e-mail Dmitri Volfson.
- cseg_1.0beta.zip (1.7Mb)
- Source distribution of the segmentation program including test image.
- cbrowser_1.0beta.zip (12Kb)
- Source distribution of the GUI-based browser. Useful for exploring the results
of the segmentation.
- History of recent program changes (and hopefully, bug fixes)
fragment of the original image
- Tutorial is coming soon
Developed by Dmitri Volfson; Natalie Ostroff has contributed several
routines for data post-pocessing. Original version of the browser
was developed by Rami C. Bitar and Jorge Viņals. Many routines
were borrowed from David Fanning's Coyote's Library.
Monitoring dynamics of single-cell gene expression over multiple cell cycles,
- Tracking software
- Particle tracking
tools developed by John Crocker, David Grier and Eric Weeks
S. Cookson, N. Ostroff, W.L. Pang, D. Volfson and J. Hasty,
submitted to Molecular Systems Biology, October (2005)
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